Saturday
October 1, 2005 |
8:00/9:00
Registration and information desk |
9:00/10:30
KEYNOTE SPEAKERS SESSIONS
The Future of Systems Biology
Dr. Søren Brunak
more information
| 09:00/09:05 |
Introduction |
Søren Brunak |
| 09:05/09:35 |
From Genome Sequence to Function |
Richard Durbin |
| 09:35/10:05 |
Biological Networks: Information and Prediction |
Chris Sander |
| 10:05/10:30 |
Questions and Debate |
All |
|
10:45/11:00
coffee break |
11:00/13:30
AREA 8: SYSTEMS BIOLOGY
Martin Kuiper and Luís Serrano
| 11:00/11:30 |
Qualitative Modeling of Regulated Metabolic Pathways: Application to the Tryptophan Biosynthesis in E. coli |
Claudine Chaouiya |
| 11:30/12:00 |
Genome-Wide Decoding of Hierarchical Modular Structure of Transcriptional Regulation by Cis-Element and Expression Clustering |
Dmitriy Leyfer |
| 12:00/12:30 |
Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data |
Naoki Nariai |
| 12:30/13:00 |
Knowledge-Based Framework for Hypothesis Formation in Biochemical Networks |
Chitta Baral |
| 13:00/13:10 |
Horizontal gene transfer depends on gene content of the host |
Martin Lercher |
| 13:10/13:20 |
Decomposing protein networks into domain-domain interactions |
Mario Albrecht |
|
13:30/15:00
Lunch |
15:00/17:00
AREA 9: ALGORITHMS
Pedro Larrañaga and Martin Vingron
| 15:00/15:30 |
Growing Bayesian Network Models of Gene Networks from Seed Genes |
Jose M Peña |
| 15:30/16:00 |
Reconsidering Complete Search Algorithms for Protein Backbone NMR Assignment |
Olga Vitek |
| 16:00/16:30 |
RNA Secondary Structural Alignment with Conditional Random Fields |
Kengo Sato |
| 16:30/16:40 |
Fast maximum-likehood refinement of electron microscopy images |
Sjors H.W. Scheres |
| 16:40/16:50 |
A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes |
Jean-Marc Schwartz |
| 16:50/17:00 |
Web Servicing the Biological Office |
Martin Szugat |
|
17:00/17:15
coffee break |
17:15/18:45
AREA 10: TEXT MINING
Christian Blaschke and Lynette Hirschman
| 17:15/17:45 |
A Probabilistic Model for Mining Implicit "Chemical Compound - Gene" Relations from Literature |
Shanfeng Zhu |
| 17:45/18:15 |
Implementing the iHOP Concept for Navigation of Biomedical Literature |
Robert Hoffmann |
| 18:15/18:45 |
Expert knowledge without the expert: Integrated analysis of gene expression and the literature to derive active functional contexts |
Robert Küffner |
|
18:45
Conference Closing |
