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Thursday
September 29, 2005

8:00/9:00
Registration and information desk

9:00/10:45
AREA 1: SPECIAL SESSION
Angel R. Ortiz and Anna Tramontano

09:00/09:30 Augmented cell-graphs for automated cancer diagnosis Cigdem Demir
09:30/10:00 A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors Ana Rojas
10:00/10:30 ARTS: Alignment of RNA Tertiary Structures Oranit Dror
10:30/10:40 Non-coding RNAs in Ciona intestinalis Kristin Missal

9:00/10:00 (Room 9 Bis (1st Floor))
DEMO 1.1: High Performance Computing
IBM speaker

more information

DEMO 1.2: Modeling and Simulations on Linux: The Accelrys Advantage
Dr. Hugues Olivier Bertrand, EMEA Life Sciences Senior Manager.

more information


10:00/11:00 (Room 9 Bis (1st Floor))
DEMO 2: A total scientific information management solution for collecting, managing, visualizing and analyzing DNA sequence data
Carmelo Volpe Ph.D.
Global Solution Design Consultant

more information

10:45/11:00
coffee break

11:00/13:30
AREA 2: DATABASES
Rolf Apweiler and José María Carazo

11:00/11:30 Predicting Post-Synaptic Activity in Proteins with Data Mining Alex A. Freitas
11:30/12:00 DPDB: a database for the storage, representation and analysis of polymorphism in the Drosophila genus Sonia Casillas
12:00/12:30 A Query Language for Biological Networks Ulf Leser
12:30/13:00 SIMAP - The similarity matrix of proteins Thomas Rattei
13:00/13:10 Design of a Description Language for Generating Wrapper to Collect Biological Data Myungeun Lim
13:10/13:20 Adding Some SPICE to DAS Andreas Prlic

11:00/12:00 (Room 9 Bis (1st Floor))
DEMO 3: Analysing genome-scale experiments through web servers
Joaquín Dopazo

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12:00/13:00 (Room 9 Bis (1st Floor))
DEMO 4: ebioSNP an essential tool in the study of the genetic diversity and its applications
Natalia Arroyo y Bruno Aranda

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13:00/14:00 (Room 9 Bis (1st Floor))
DEMO 5: Science: Make your next discovery on a Mac
Iván Peña - Technical Consulting
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13:30/15:00
Lunch

15:00/17:00
AREA 3: PROTEIN STRUCTURE and FUNCTION
Baldo Oliva and Burkhard Rost

15:00/15:30 Predicting protein stability changes from sequence with Support Vector Machines Emidio Capriotti
15:30/16:00 Fast Protein Classification with Multiple Networks HyngJung Shin
16:00/16:30 Less is More: Towards an Optimal Universal Description of the Universe of Protein Folds Joseph Szustakowski
16:30/17:00 Evaluating the usefulness of protein structure models for molecular replacement Alejandro Giorgetti

14:00/15:00 (Room 9 Bis (1st Floor))
DEMO 6: Text Mining for the Life Sciences
Christian Blaschke
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16:00/17:00 (Room 9 Bis (1st Floor))
DEMO 7: Comparative genomics EnsEMBL
Javier Herrero
more information

17:00/17:15
coffee break

17:00/18:00 (Room 9 Bis (1st Floor))
DEMO 8: Toward the Modeling and Prediction of the Preclinical Profile
of Molecular Entities

Ann Wescott

more information

17:15/18:30
Posters Session Areas:
A (Databases), B (Algorithms),
C
(Protein Structure and Function), G (Microarrays)

18:30/20:30
AREA 4: GENES and GENOMES
Mar Albà and Pierre Rouzé

18:30/19:00 Building Fragment Assembly String Graphs Gene Myers
19:00/19:30 Finding Exact Optimal Motif in Matrix Representation by Partitioning Henry Leung
19:30/20:00 Prediction of regulatory modules comprising microRNAs and target genes Sungroh Yoon
20:00/20:30 Computational Discovery of Transcriptional Regulatory Rules Tho Hoan Pham

 

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