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Introduction to Sequence Analysis
Nucleotide Analysis
Translating our sequence with EMBOSS Transeq
Transeq
translates nucleic acid sequences to the corresponding peptide sequence. It can translate in any of the 3
forward or three reverse sense frames, or in all three forward or reverse frames, or in all six frames.
We will use as an example the previous sequence 2
(
http://ubio.bioinfo.cnio.es/people/ograna/public_html/introductionToSequenceAnalysis/checkingForVectorContamina
tion/sequence2.txt
)
The Transeq form here:
http://www.ebi.ac.uk/Tools/emboss/transeq/